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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ATAC-seq
16
total RNA-seq
4
pCHi-C
3
DNase-seq
2
ChIP-seq
Assay category
19
DNA accessibility
16
Transcription
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
21
October, 2019
17
February, 2023
3
June, 2019
February, 2020
Available data
18
bed narrowPeak
3
bam
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
2
tsv
Organism
41
Homo sapiens
Biosample type
41
tissue
Organ
945
pancreas
790
liver
682
connective tissue
epithelium
489
adipose tissue
354
kidney
350
heart
274
brain
233
vasculature
227
blood vessel
159
bone element
139
artery
119
limb
94
musculature of body
69
blood
69
bodily fluid
60
eye
42
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
41
AMP
Genome assembly (visualization)
18
hg19
3
GRCh38
Lab
41
AMP-T2D consortium
organ_slims!
epithelium
month_released!
February, 2020
BIOSAMPLE
ASSAY
41 results
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ATAC-seq
total RNA-seq
pCHi-C
DNase-seq
ChIP-seq
tissue
islet of Langerhans
1
14
4
2
retina
15
2
3
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