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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
22
ATAC-seq
12
DNase-seq
2
FAIRE-seq
Assay category
61
DNA binding
36
DNA accessibility
Target of assay
50
histone
50
histone modification
30
broad histone mark
20
narrow histone mark
11
transcription factor
7
RNA binding protein
Date released
40
October, 2018
17
August, 2017
14
September, 2018
10
June, 2019
7
October, 2019
5
September, 2017
3
November, 2018
1
May, 2019
Available data
696
bam
629
bigWig
471
fastq
422
tsv
247
bed narrowPeak
97
bigBed narrowPeak
80
zippedFastqFolder
33
bed bed3+
25
bed broadPeak
19
tagAlign
11
bigBed broadPeak
7
bed bedMethyl
7
bedpe bed3+
7
bigBed bedMethyl
7
hic
6
txt
3
cool
1
bedpe
1
hdf5
Organism
91
Homo sapiens
Biosample type
65
tissue
25
primary cell
7
cell line
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
97
AMP
Genome assembly (visualization)
95
GRCh38
95
hg19
Lab
97
AMP-T2D consortium
Audit category:
5
inconsistent control read length
1
inconsistent assembly
organ_slims!
spinal cord
BIOSAMPLE
ASSAY
97 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
body of pancreas
26
4
pancreas
13
2
1
endocrine pancreas
14
retina
3
islet of Langerhans
1
1
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
retinal pigment epithelial cell
2
1
cell line
Panc1
6
1
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