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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ATAC-seq
10
DNase-seq
Assay category
557
DNA binding
212
Transcription
61
DNA accessibility
8
DNA methylation
3
3D chromatin structure
1
DNA sequencing
Date released
27
February, 2023
20
May, 2022
6
June, 2019
3
November, 2018
2
August, 2017
2
October, 2019
1
February, 2021
Available data
59
bed narrowPeak
30
bigWig
12
bam
10
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
4
fastq
1
bed bed3
Organism
61
Homo sapiens
Biosample type
56
tissue
4
primary cell
1
cell line
Organ
173
pancreas
163
kidney
123
epithelium
77
heart
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
61
AMP
Genome assembly (visualization)
59
hg19
12
GRCh38
Lab
41
AMP-T2D consortium
20
Karen Mohlke, UNC
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
organ_slims!
vasculature
BIOSAMPLE
ASSAY
61 results
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ATAC-seq
DNase-seq
tissue
liver
20
2
retina
15
3
pigmented layer of retina
12
right lobe of liver
1
2
islet of Langerhans
1
primary cell
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
hepatocyte
1
retinal pigment epithelial cell
1
cell line
HepG2
1
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