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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
Assay category
420
Transcription
78
DNA binding
40
DNA accessibility
7
DNA methylation
Target of assay
35
histone
35
histone modification
25
control
20
broad histone mark
18
transcription factor
15
narrow histone mark
6
RNA binding protein
Date released
50
August, 2017
23
October, 2018
3
June, 2019
2
October, 2019
Available data
40
bam
37
fastq
21
bigWig
9
bed narrowPeak
8
bigBed narrowPeak
8
tagAlign
4
bed bed3+
1
bed broadPeak
Organism
78
Homo sapiens
Biosample type
75
tissue
3
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
78
AMP
Genome assembly (visualization)
21
hg19
20
GRCh38
Lab
78
AMP-T2D consortium
Audit category:
12
missing controlled_by
BIOSAMPLE
ASSAY
78 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
subcutaneous adipose tissue
12
white adipose tissue
12
omental fat pad
11
adipose tissue
2
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primary cell
retinal pigment epithelial cell
3
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