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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
DNase-seq
4
ChIP-seq
Assay category
13
DNA accessibility
4
DNA binding
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
RNA binding protein
1
narrow histone mark
1
transcription factor
Date released
9
June, 2019
6
October, 2019
2
November, 2017
Available data
187
bam
162
bed narrowPeak
156
bigWig
85
bigBed narrowPeak
73
tsv
17
bed broadPeak
17
bigBed broadPeak
15
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
17
Homo sapiens
Biosample type
9
primary cell
8
tissue
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
17
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
17
AMP-T2D consortium
BIOSAMPLE
ASSAY
17 results
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DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
kidney capillary endothelial cell
1
retinal pigment epithelial cell
1
tissue
retina
3
coronary artery
2
tibial artery
2
ascending aorta
1
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