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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
11
DNase-seq
4
total RNA-seq
2
ATAC-seq
1
WGBS
Assay category
68
DNA binding
13
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
64
histone
64
histone modification
41
broad histone mark
23
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
36
May, 2019
33
October, 2019
9
June, 2019
5
July, 2019
2
November, 2017
1
March, 2020
Available data
86
bam
86
bigWig
81
bed narrowPeak
79
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
4
tsv
2
fastq
1
bed bedMethyl
1
bigBed bedMethyl
Organism
86
Homo sapiens
Biosample type
67
tissue
19
primary cell
Organ
635
pancreas
566
connective tissue
531
liver
424
adipose tissue
294
epithelium
heart
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
0
lung
Project
86
AMP
Genome assembly (visualization)
121
hg19
86
GRCh38
Lab
86
AMP-T2D consortium
organ_slims!
heart
BIOSAMPLE
ASSAY
86 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial artery
18
2
1
ascending aorta
13
1
1
thoracic aorta
12
2
1
aorta
11
1
1
retina
3
primary cell
endothelial cell of umbilical vein
10
2
brain microvascular endothelial cell
2
1
retinal pigment epithelial cell
2
1
kidney capillary endothelial cell
1
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