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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
81
total RNA-seq
40
ATAC-seq
4
pCHi-C
3
DNase-seq
2
ChIP-seq
Assay category
81
Transcription
43
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
150
February, 2021
39
February, 2023
21
October, 2019
3
June, 2019
1
February, 2020
Available data
88
txt
69
bam
63
tsv
61
bigWig
38
bed narrowPeak
4
bed bed3
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
Organism
214
Homo sapiens
Biosample type
214
tissue
6
primary cell
Organ
547
connective tissue
505
pancreas
488
adipose tissue
361
liver
299
kidney
273
heart
265
brain
158
bone element
133
blood vessel
133
vasculature
122
limb
82
musculature of body
73
artery
56
eye
43
nerve
25
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
214
AMP
Genome assembly (visualization)
100
hg19
69
GRCh38
Lab
214
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
BIOSAMPLE
ASSAY
214 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
DNase-seq
ChIP-seq
tissue
bone element
84
bone tissue
58
islet of Langerhans
14
1
4
2
retina
3
15
3
pigmented layer of retina
2
12
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