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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
5
pCHi-C
3
ChIP-seq
1
RRBS
Assay category
19
Transcription
3
DNA binding
DNA accessibility
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
20
October, 2019
4
February, 2023
1
February, 2020
1
July, 2019
1
June, 2019
1
May, 2021
Available data
5
tsv
3
bam
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
28
Homo sapiens
Biosample type
25
tissue
3
primary cell
Organ
633
pancreas
592
connective tissue
476
adipose tissue
349
liver
304
epithelium
202
heart
152
kidney
147
bone element
103
vasculature
101
blood vessel
79
brain
67
artery
34
musculature of body
30
limb
27
eye
23
embryo
16
nerve
11
spleen
10
lung
9
vein
6
blood
6
bodily fluid
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
27
AMP
1
T1D
Genome assembly (visualization)
1
hg19
Lab
27
AMP-T2D consortium
1
Kyle Gaulton, UCSD
assay_slims!
DNA accessibility
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
28 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
14
4
2
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
1
megakaryocyte
1
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