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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
5
ChIP-seq
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
31
February, 2023
17
October, 2019
3
June, 2019
1
February, 2020
1
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
53
Homo sapiens
Biosample type
49
tissue
4
primary cell
Organ
924
pancreas
725
liver
669
connective tissue
502
epithelium
486
adipose tissue
360
heart
274
kidney
237
brain
218
vasculature
216
blood vessel
158
bone element
137
artery
86
limb
69
blood
69
bodily fluid
53
eye
49
musculature of body
41
nerve
37
embryo
23
spleen
19
lung
18
vein
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
0
bone marrow
Project
53
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
53
AMP-T2D consortium
files.file_type!
bed broadPeak
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
53 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
RRBS
tissue
retina
15
3
islet of Langerhans
1
14
2
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
3
1
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