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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
5
pCHi-C
3
ChIP-seq
1
ATAC-seq
1
RRBS
Assay category
19
Transcription
3
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
21
October, 2019
4
February, 2023
1
February, 2020
1
July, 2019
1
June, 2019
1
May, 2021
Available data
bed narrowPeak
7
bam
6
bigBed narrowPeak
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
29
Homo sapiens
Biosample type
26
tissue
3
primary cell
Organ
285
pancreas
209
epithelium
167
liver
159
kidney
126
heart
111
connective tissue
93
bone element
64
adipose tissue
63
brain
38
vasculature
37
blood vessel
28
eye
28
musculature of body
25
limb
20
lung
14
blood
14
bodily fluid
13
artery
12
nerve
9
spleen
8
embryo
8
skeleton
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
28
AMP
1
T1D
Genome assembly (visualization)
1
hg19
Lab
28
AMP-T2D consortium
1
Kyle Gaulton, UCSD
files.file_type!
bed narrowPeak
bigWig
BIOSAMPLE
ASSAY
29 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
ATAC-seq
RRBS
tissue
islet of Langerhans
14
4
2
1
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
1
megakaryocyte
1
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