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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
Assay category
11
DNA binding
Target of assay
15
histone
15
histone modification
11
narrow histone mark
8
control
4
broad histone mark
4
transcription factor
1
RNA binding protein
Date released
5
December, 2017
3
February, 2018
2
October, 2019
1
June, 2019
Available data
9
bam
8
bed narrowPeak
8
bigWig
8
fastq
1
bed bed3+
1
bigBed narrowPeak
Organism
11
Homo sapiens
Biosample type
8
in vitro differentiated cells
2
tissue
1
primary cell
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
11
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
11
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
11 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
pancreatic endoderm
6
Hepatic endoderm
2
tissue
islet of Langerhans
2
primary cell
retinal pigment epithelial cell
1
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