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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
total RNA-seq
28
ATAC-seq
ChIP-seq
4
DNase-seq
4
pCHi-C
1
GRO-seq
1
RRBS
Assay category
33
Transcription
32
DNA accessibility
1
DNA methylation
Date released
31
February, 2023
19
October, 2019
8
August, 2021
4
February, 2018
4
June, 2019
2
May, 2021
1
February, 2020
1
January, 2018
1
July, 2019
Available data
31
bed narrowPeak
19
bigWig
19
tsv
18
bam
5
fastq
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
71
Homo sapiens
Biosample type
54
tissue
8
cell line
7
in vitro differentiated cells
2
primary cell
Organ
526
connective tissue
507
pancreas
418
adipose tissue
259
heart
237
epithelium
186
liver
158
bone element
134
vasculature
131
blood vessel
111
kidney
107
artery
68
brain
57
musculature of body
56
eye
56
limb
18
ureter
16
skeleton
15
embryo
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
1
adrenal gland
1
blood
1
bodily fluid
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
71
AMP
Genome assembly (visualization)
46
hg19
18
GRCh38
1
hg18
Lab
71
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
71 results
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total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
GRO-seq
RRBS
tissue
retina
3
15
3
islet of Langerhans
14
1
4
pigmented layer of retina
2
12
cell line
H1-hESC
8
in vitro differentiated cells
pancreatic endoderm
4
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
primary cell
retinal pigment epithelial cell
1
1
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