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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
16
ChIP-seq
4
DNase-seq
Assay category
31
DNA accessibility
16
DNA binding
Target of assay
12
histone
12
histone modification
8
narrow histone mark
4
broad histone mark
4
transcription factor
1
RNA binding protein
Date released
27
February, 2023
8
December, 2017
6
February, 2018
6
June, 2019
Available data
47
bed narrowPeak
44
bam
36
bigWig
27
fastq
20
tsv
7
bed bed3+
6
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
47
Homo sapiens
Biosample type
30
tissue
14
in vitro differentiated cells
3
primary cell
Organ
441
liver
214
pancreas
203
brain
191
heart
183
kidney
151
epithelium
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
0
pericardium
Project
47
AMP
Genome assembly (visualization)
47
hg19
20
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
3
inconsistent control read length
BIOSAMPLE
ASSAY
47 results
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ATAC-seq
ChIP-seq
DNase-seq
tissue
retina
15
3
pigmented layer of retina
12
in vitro differentiated cells
pancreatic endoderm
12
Hepatic endoderm
2
primary cell
retinal pigment epithelial cell
2
1
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