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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
3
MeRIP-seq
Assay category
26
DNA binding
Target of assay
93
histone
93
histone modification
49
narrow histone mark
44
broad histone mark
29
control
8
RNA binding protein
8
transcription factor
3
nucleotide modification
1
chromatin remodeller
Date released
12
August, 2017
3
December, 2017
3
November, 2020
3
October, 2019
2
June, 2019
2
November, 2017
2
November, 2019
1
August, 2021
1
May, 2019
May, 2021
Available data
26
bam
17
fastq
2
bigWig
1
tagAlign
Organism
29
Homo sapiens
Biosample type
21
primary cell
5
cell line
3
in vitro differentiated cells
Organ
108
liver
52
pancreas
35
connective tissue
31
brain
29
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
29
AMP
Genome assembly (visualization)
2
hg19
Lab
26
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
9
inconsistent ontology term
month_released!
May, 2021
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
MeRIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
2
epithelial cell of proximal tubule
2
brain microvascular endothelial cell
1
+ See 4 more…
cell line
EndoC_BH1
2
3
in vitro differentiated cells
Hepatic endoderm
2
hepatocyte
1
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