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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
Assay category
59
DNA binding
Target of assay
339
transcription factor
109
control
106
histone modification
105
histone
82
recombinant protein
63
narrow histone mark
59
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
34
November, 2017
19
November, 2018
4
December, 2017
1
August, 2021
1
June, 2019
Available data
58
bam
57
bed narrowPeak
57
bigWig
57
fastq
56
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
1
tar
Organism
59
Homo sapiens
Biosample type
54
cell line
2
in vitro differentiated cells
2
tissue
1
primary cell
Organ
58
liver
10
blood
10
bodily fluid
10
connective tissue
9
pancreas
8
epithelium
6
heart
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
3
kidney
1
artery
1
eye
Project
59
AMP
Genome assembly (visualization)
56
hg19
52
GRCh38
Lab
58
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
BIOSAMPLE
ASSAY
59 results
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ChIP-seq
cell line
HepG2
54
in vitro differentiated cells
hepatocyte
2
tissue
liver
1
right lobe of liver
1
primary cell
retinal pigment epithelial cell
1
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