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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
DNase-seq
29
ChIP-seq
27
ATAC-seq
Assay category
64
DNA accessibility
29
DNA binding
Target of assay
28
histone
28
histone modification
16
broad histone mark
12
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
47
June, 2019
27
February, 2023
13
August, 2017
6
May, 2019
Available data
93
bed narrowPeak
74
bigWig
64
bam
53
bigBed narrowPeak
50
bed broadPeak
38
bed bed3+
37
bigBed broadPeak
15
tagAlign
14
tsv
5
bed bedMethyl
5
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
93
Homo sapiens
Biosample type
81
tissue
12
primary cell
Organ
441
liver
214
pancreas
203
brain
183
kidney
151
epithelium
151
heart
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
93
AMP
Genome assembly (visualization)
93
hg19
52
GRCh38
Lab
93
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
93 results
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DNase-seq
ChIP-seq
ATAC-seq
tissue
muscle of leg
13
6
retina
3
15
muscle of arm
17
skeletal muscle tissue
13
pigmented layer of retina
12
+ See 2 more…
primary cell
skeletal muscle satellite cell
7
retinal pigment epithelial cell
1
2
skeletal muscle cell
1
1
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