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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
29
ATAC-seq
24
total RNA-seq
DNase-seq
4
pCHi-C
1
RRBS
Assay category
40
DNA binding
29
DNA accessibility
24
Transcription
1
DNA methylation
Target of assay
27
histone
27
histone modification
16
broad histone mark
12
control
11
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
61
October, 2019
31
February, 2023
3
June, 2019
2
February, 2020
1
July, 2019
Available data
54
bed narrowPeak
43
bam
31
bigWig
26
bigBed narrowPeak
10
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
98
Homo sapiens
Biosample type
94
tissue
4
primary cell
Organ
938
pancreas
785
liver
675
connective tissue
505
epithelium
489
adipose tissue
323
heart
273
kidney
254
brain
225
vasculature
221
blood vessel
159
bone element
137
artery
86
limb
69
blood
69
bodily fluid
63
musculature of body
57
eye
41
nerve
37
embryo
24
spleen
20
lung
20
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
98
AMP
Genome assembly (visualization)
59
hg19
31
GRCh38
Lab
98
AMP-T2D consortium
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
98 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
pCHi-C
RRBS
tissue
tibial nerve
35
1
5
islet of Langerhans
2
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
3
1
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