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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
6
DNase-seq
4
total RNA-seq
1
ATAC-seq
Assay category
38
DNA binding
7
DNA accessibility
4
Transcription
Target of assay
25
histone
25
histone modification
16
broad histone mark
12
control
9
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
42
October, 2019
7
June, 2019
Available data
60
bed narrowPeak
49
bam
37
bigWig
32
bigBed narrowPeak
10
tsv
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
49
Homo sapiens
Biosample type
45
tissue
4
primary cell
Organ
689
pancreas
681
liver
593
connective tissue
442
adipose tissue
317
epithelium
243
brain
211
heart
185
vasculature
180
blood vessel
144
kidney
114
limb
102
artery
66
bone element
60
blood
60
bodily fluid
57
musculature of body
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
49
AMP
Genome assembly (visualization)
37
GRCh38
37
hg19
Lab
49
AMP-T2D consortium
BIOSAMPLE
ASSAY
49 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
tissue
tibial nerve
35
2
4
1
retina
3
primary cell
retinal pigment epithelial cell
3
1
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