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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
3
DNase-seq
Assay category
31
DNA accessibility
19
Transcription
Target of assay
2
histone
2
histone modification
narrow histone mark
Date released
31
February, 2023
19
October, 2019
3
June, 2019
1
February, 2020
Available data
30
bed narrowPeak
5
tsv
3
bam
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
Organism
54
Homo sapiens
Biosample type
54
tissue
4
primary cell
Organ
534
connective tissue
476
adipose tissue
473
pancreas
317
liver
289
kidney
250
heart
158
bone element
151
brain
115
blood vessel
115
vasculature
107
limb
73
musculature of body
67
artery
54
eye
35
nerve
23
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
54
AMP
Genome assembly (visualization)
30
hg19
3
GRCh38
Lab
54
AMP-T2D consortium
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
54 results
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ATAC-seq
total RNA-seq
pCHi-C
DNase-seq
tissue
retina
15
3
3
islet of Langerhans
1
14
4
pigmented layer of retina
12
2
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