Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
5
total RNA-seq
4
DNase-seq
1
ChIP-seq
1
RRBS
Assay category
31
DNA accessibility
5
Transcription
1
DNA binding
1
DNA methylation
Target of assay
1
RNA binding protein
control
1
histone
1
histone modification
narrow histone mark
1
transcription factor
Date released
31
February, 2023
October, 2019
5
June, 2019
1
February, 2020
1
July, 2019
Available data
32
bed narrowPeak
5
bam
5
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
38
Homo sapiens
Biosample type
35
tissue
3
primary cell
Organ
811
pancreas
618
liver
613
connective tissue
454
adipose tissue
422
epithelium
327
heart
308
kidney
159
bone element
158
vasculature
154
blood vessel
133
brain
109
artery
77
musculature of body
62
blood
62
bodily fluid
50
limb
38
eye
22
embryo
20
lung
18
ureter
16
skeleton
15
spleen
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
38
AMP
Genome assembly (visualization)
33
hg19
5
GRCh38
Lab
38
AMP-T2D consortium
target.investigated_as!
control
narrow histone mark
month_released!
October, 2019
BIOSAMPLE
ASSAY
38 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
DNase-seq
ChIP-seq
RRBS
tissue
retina
15
3
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
1
1
Download