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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
2
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
31
February, 2023
19
October, 2019
2
June, 2019
1
February, 2020
1
July, 2019
Available data
32
bed narrowPeak
6
bam
5
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
54
Homo sapiens
Biosample type
51
tissue
3
primary cell
Organ
856
pancreas
674
liver
642
connective tissue
477
adipose tissue
455
epithelium
298
heart
261
kidney
195
vasculature
193
blood vessel
159
bone element
131
artery
130
brain
71
limb
68
blood
68
bodily fluid
54
eye
42
musculature of body
33
nerve
29
embryo
22
spleen
20
lung
16
skeleton
12
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
54
AMP
Genome assembly (visualization)
29
hg19
1
GRCh38
Lab
54
AMP-T2D consortium
target.investigated_as!
narrow histone mark
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
2
1
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