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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
WGBS
2
pCHi-C
1
ATAC-seq
1
DNase-seq
Assay category
24
DNA binding
2
DNA accessibility
Target of assay
10
histone
10
histone modification
8
control
6
narrow histone mark
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
Date released
7
December, 2018
7
January, 2019
7
November, 2018
4
October, 2019
2
March, 2020
1
October, 2017
Available data
22
bam
22
fastq
14
bed narrowPeak
14
bigWig
13
bigBed narrowPeak
2
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
28
Homo sapiens
Biosample type
28
tissue
Organ
895
pancreas
786
liver
678
connective tissue
485
adipose tissue
477
epithelium
354
kidney
345
heart
286
brain
234
vasculature
228
blood vessel
159
bone element
141
artery
121
limb
95
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
23
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
28
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
28
AMP-T2D consortium
assay_title!
WGBS
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
pCHi-C
ATAC-seq
DNase-seq
tissue
spleen
20
1
1
1
islet of Langerhans
4
ovary
1
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