Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
93
single cell RNA-seq
72
total RNA-seq
47
ATAC-seq
30
DNase-seq
8
WGBS
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
Assay category
94
DNA binding
30
DNA accessibility
Target of assay
62
histone
62
histone modification
37
broad histone mark
25
narrow histone mark
20
control
12
transcription factor
6
RNA binding protein
Date released
57
April, 2019
35
June, 2019
21
May, 2019
6
February, 2021
5
October, 2019
Available data
123
bam
104
bed narrowPeak
104
bigWig
94
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
6
tagAlign
Organism
124
Homo sapiens
Biosample type
110
tissue
8
primary cell
6
cell line
Organ
558
liver
250
brain
226
pancreas
162
connective tissue
148
epithelium
133
kidney
124
heart
113
vasculature
108
blood vessel
102
limb
75
adipose tissue
72
musculature of body
60
blood
60
bodily fluid
38
artery
37
nerve
22
embryo
21
spleen
19
vein
18
ureter
9
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
124
AMP
Genome assembly (visualization)
103
GRCh38
101
hg19
Lab
124
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
124 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
tissue
heart left ventricle
35
3
heart
14
18
heart right ventricle
13
1
right atrium auricular region
10
2
coronary artery
5
2
+ See 2 more…
primary cell
cardiac fibroblast
5
3
cell line
smooth muscle cell of the coronary artery
6
See all biosamples
Download