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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
134
ChIP-seq
single cell RNA-seq
72
total RNA-seq
47
ATAC-seq
30
DNase-seq
8
WGBS
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
Assay category
72
Transcription
3
3D chromatin structure
Date released
52
February, 2021
10
July, 2019
4
March, 2020
3
February, 2020
3
May, 2021
3
October, 2019
Available data
72
tsv
69
bam
69
bigWig
3
bedpe bed3+
3
hic
Organism
75
Homo sapiens
Biosample type
52
cell line
18
tissue
4
primary cell
1
in vitro differentiated cells
Organ
475
connective tissue
412
pancreas
398
adipose tissue
193
liver
139
epithelium
75
heart
66
blood vessel
66
vasculature
62
bone element
61
kidney
56
artery
20
brain
19
eye
14
embryo
12
musculature of body
11
limb
5
nerve
4
skeleton
2
vein
1
pericardium
1
spinal cord
Project
75
AMP
Genome assembly (visualization)
72
hg19
69
GRCh38
Lab
75
AMP-T2D consortium
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
75 results
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total RNA-seq
Hi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
heart
4
1
heart left ventricle
3
1
right atrium auricular region
3
heart right ventricle
1
1
cardiac atrium
1
+ See 3 more…
primary cell
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
in vitro differentiated cells
cardiac fibroblast
1
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