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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
93
single cell RNA-seq
72
total RNA-seq
47
ATAC-seq
30
DNase-seq
8
WGBS
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
Assay category
30
DNA accessibility
3
3D chromatin structure
Date released
30
June, 2019
2
March, 2020
1
October, 2019
Available data
30
bam
30
bed bed3+
30
bed broadPeak
30
bed narrowPeak
30
bigBed broadPeak
30
bigBed narrowPeak
30
bigWig
3
bedpe bed3+
3
hic
Organism
33
Homo sapiens
Biosample type
30
tissue
3
primary cell
Organ
82
kidney
40
limb
39
musculature of body
35
brain
33
heart
27
epithelium
18
ureter
17
pancreas
16
vasculature
14
blood vessel
10
connective tissue
10
liver
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
33
AMP
Genome assembly (visualization)
30
GRCh38
30
hg19
Lab
33
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
33 results
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DNase-seq
Hi-C
tissue
heart
18
1
heart left ventricle
3
1
coronary artery
2
heart right ventricle
1
1
right atrium auricular region
2
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primary cell
cardiac fibroblast
3
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