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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
35
ATAC-seq
8
WGBS
3
DNase-seq
3
pCHi-C
3
total RNA-seq
Assay category
96
Transcription
38
DNA accessibility
8
DNA methylation
Target of assay
control
Date released
92
August, 2021
36
February, 2023
8
July, 2019
3
February, 2020
3
June, 2019
3
March, 2020
Available data
98
tsv
38
bed narrowPeak
9
bam
9
bigWig
6
bed bedMethyl
6
bigBed bedMethyl
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
Organism
145
Homo sapiens
Biosample type
144
tissue
1
primary cell
Organ
237
pancreas
213
kidney
185
epithelium
145
heart
97
brain
89
bone element
72
liver
61
connective tissue
51
blood vessel
51
vasculature
41
adipose tissue
39
artery
26
eye
20
lung
17
musculature of body
9
limb
8
blood
8
bodily fluid
5
gonad
5
ovary
4
skeleton
3
spleen
3
vein
2
embryo
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
145
AMP
Genome assembly (visualization)
226
GRCh38
hg19
Lab
145
AMP-T2D consortium
assembly!
hg19
target.investigated_as!
control
BIOSAMPLE
ASSAY
145 results
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single cell RNA-seq
ATAC-seq
WGBS
DNase-seq
pCHi-C
total RNA-seq
tissue
coronary artery
35
1
heart left ventricle
18
4
1
heart right ventricle
17
2
1
right cardiac atrium
18
1
1
left cardiac atrium
18
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primary cell
cardiac fibroblast
1
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