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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
2
ATAC-seq
Assay category
70
DNA binding
2
DNA accessibility
Target of assay
57
histone
57
histone modification
34
broad histone mark
23
narrow histone mark
13
transcription factor
11
RNA binding protein
Date released
46
April, 2019
15
May, 2019
5
October, 2018
3
June, 2019
2
August, 2017
1
October, 2019
Available data
653
bam
649
bigWig
569
tsv
204
bed narrowPeak
104
bigBed narrowPeak
44
fastq
36
bed bed3+
bed broadPeak
32
bigBed broadPeak
14
tagAlign
10
bed bedMethyl
10
bigBed bedMethyl
4
bedpe bed3+
3
hic
Organism
72
Homo sapiens
Biosample type
69
tissue
3
primary cell
Organ
301
liver
81
brain
78
pancreas
68
blood vessel
68
vasculature
64
heart
56
epithelium
54
blood
54
bodily fluid
48
limb
26
kidney
24
nerve
21
artery
19
connective tissue
14
musculature of body
12
spleen
11
vein
8
adipose tissue
2
eye
Project
72
AMP
Genome assembly (visualization)
72
hg19
71
GRCh38
Lab
72
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
72 results
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ChIP-seq
ATAC-seq
tissue
heart left ventricle
28
heart right ventricle
11
heart
7
right atrium auricular region
7
right cardiac atrium
5
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primary cell
cardiac fibroblast
3
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