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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
total RNA-seq
6
WGBS
1
small RNA-seq
Assay category
70
Transcription
6
DNA methylation
Date released
52
February, 2021
17
July, 2019
3
May, 2021
2
March, 2020
2
October, 2019
Available data
211
bam
184
bigWig
168
tsv
bed narrowPeak
94
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
76
Homo sapiens
Biosample type
52
cell line
19
tissue
4
primary cell
1
in vitro differentiated cells
Organ
498
connective tissue
447
pancreas
414
adipose tissue
183
liver
164
epithelium
76
heart
65
vasculature
64
blood vessel
58
bone element
54
artery
20
brain
15
embryo
12
kidney
8
musculature of body
5
limb
4
nerve
2
spleen
2
vein
1
blood
1
bodily fluid
1
pericardium
Project
76
AMP
Genome assembly (visualization)
76
GRCh38
70
hg19
Lab
76
AMP-T2D consortium
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
76 results
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total RNA-seq
WGBS
small RNA-seq
cell line
smooth muscle cell of the coronary artery
52
tissue
heart
4
1
1
heart left ventricle
3
2
heart right ventricle
1
2
right atrium auricular region
2
cardiac atrium
1
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primary cell
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
in vitro differentiated cells
cardiac fibroblast
1
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