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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
8
ATAC-seq
3
DNase-seq
1
RRBS
Assay category
11
DNA accessibility
11
DNA binding
1
DNA methylation
Target of assay
5
transcription factor
4
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
Date released
14
February, 2021
8
June, 2019
1
July, 2019
Available data
79
bam
67
bigWig
tsv
18
bed narrowPeak
6
bigBed narrowPeak
6
tagAlign
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
23
Homo sapiens
Biosample type
tissue
14
cell line
9
primary cell
Organ
410
liver
356
epithelium
299
pancreas
116
connective tissue
69
blood
69
bodily fluid
49
vasculature
43
blood vessel
43
kidney
23
embryo
23
heart
22
vein
18
brain
14
artery
12
musculature of body
5
eye
1
adipose tissue
1
bone element
1
bone marrow
Project
23
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
23
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
tsv
biosample_type!
tissue
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
ATAC-seq
DNase-seq
RRBS
cell line
smooth muscle cell of the coronary artery
6
8
primary cell
cardiac fibroblast
5
3
1
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