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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
single cell RNA-seq
78
total RNA-seq
4
pCHi-C
1
small RNA-seq
Assay category
177
Transcription
Date released
98
August, 2021
52
February, 2021
14
July, 2019
7
March, 2020
5
February, 2020
3
May, 2021
2
October, 2019
Available data
320
bam
275
bigWig
231
bed narrowPeak
181
tsv
172
bigBed narrowPeak
45
bed broadPeak
45
bigBed broadPeak
41
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
6
fastq
6
hic
6
tagAlign
5
bedpe bed3+
2
hdf5
1
tar
Organism
181
Homo sapiens
Biosample type
124
tissue
52
cell line
4
primary cell
1
in vitro differentiated cells
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
181
AMP
Genome assembly (visualization)
74
GRCh38
74
hg19
Lab
181
AMP-T2D consortium
BIOSAMPLE
ASSAY
181 results
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single cell RNA-seq
total RNA-seq
pCHi-C
small RNA-seq
tissue
heart left ventricle
18
3
1
heart right ventricle
17
1
1
right cardiac atrium
18
1
left cardiac atrium
18
aorta
4
1
1
+ See 15 more…
cell line
smooth muscle cell of the coronary artery
52
primary cell
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
in vitro differentiated cells
cardiac fibroblast
1
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