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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ATAC-seq
39
total RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
47
DNA accessibility
40
Transcription
Date released
98
August, 2021
98
February, 2021
88
February, 2023
80
May, 2022
61
September, 2018
57
April, 2019
55
June, 2019
43
October, 2019
37
July, 2019
33
April, 2018
33
July, 2018
29
August, 2017
29
May, 2021
26
May, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
March, 2020
7
August, 2020
6
December, 2019
6
November, 2017
6
November, 2020
5
September, 2017
3
August, 2018
3
February, 2020
3
October, 2022
2
October, 2018
1
June, 2018
Available data
47
bed narrowPeak
37
fastq
2
tsv
Organism
87
Homo sapiens
Biosample type
50
tissue
37
primary cell
1
cell line
Organ
56
pancreas
52
epithelium
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
14
connective tissue
8
bone element
8
skeleton
1
adipose tissue
1
brain
Project
51
AMP
37
HPAP
Genome assembly (visualization)
35
GRCh38
12
hg19
Lab
51
AMP-T2D consortium
37
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
88 results
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Clear Filters
ATAC-seq
total RNA-seq
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
tissue
coronary artery
35
pigmented layer of retina
12
2
heart
1
primary cell
pancreatic alpha cell
27
pancreatic beta cell
10
cell line
EndoC_BH1
1
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