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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
8
total RNA-seq
3
DNase-seq
1
Hi-C
Assay category
26
DNA binding
8
Transcription
3
DNA accessibility
1
3D chromatin structure
Target of assay
13
histone
13
histone modification
7
narrow histone mark
7
recombinant protein
7
transcription factor
6
broad histone mark
6
control
Date released
222
August, 2021
116
June, 2019
80
April, 2019
74
February, 2021
47
September, 2023
38
October, 2019
36
February, 2023
36
July, 2019
26
May, 2019
14
May, 2023
9
March, 2020
3
December, 2019
3
February, 2020
3
May, 2021
Available data
35
bam
29
bigWig
21
bed narrowPeak
8
tsv
1
bedpe bed3+
1
bigBed narrowPeak
1
hic
Organism
38
Homo sapiens
Biosample type
15
cell line
12
tissue
11
primary cell
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
38
AMP
Genome assembly (visualization)
30
hg19
29
GRCh38
Lab
38
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
BIOSAMPLE
ASSAY
38 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
Hi-C
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
glomerular visceral epithelial cell
1
1
tissue
heart
5
2
1
kidney
4
primary cell
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
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