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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
16
ChIP-seq
8
WGBS
3
DNase-seq
3
pCHi-C
2
total RNA-seq
Assay category
95
Transcription
16
DNA binding
8
DNA methylation
3
DNA accessibility
Target of assay
16
control
Date released
92
August, 2021
10
April, 2019
8
July, 2019
5
June, 2019
4
May, 2019
3
March, 2020
2
February, 2020
1
February, 2023
Available data
97
tsv
25
bam
9
bigWig
6
bed bedMethyl
6
bigBed bedMethyl
3
bed bed3+
3
bed broadPeak
3
bed narrowPeak
3
bigBed broadPeak
3
bigBed narrowPeak
Organism
125
Homo sapiens
Biosample type
122
tissue
3
primary cell
Organ
288
pancreas
225
kidney
213
epithelium
166
liver
165
heart
122
brain
95
connective tissue
89
bone element
71
blood vessel
71
vasculature
65
adipose tissue
artery
27
eye
26
limb
23
musculature of body
20
lung
14
blood
14
bodily fluid
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
125
AMP
Genome assembly (visualization)
119
GRCh38
hg19
Lab
125
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
artery
assembly!
hg19
BIOSAMPLE
ASSAY
125 results
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single cell RNA-seq
ChIP-seq
WGBS
DNase-seq
pCHi-C
total RNA-seq
tissue
heart left ventricle
18
6
4
1
heart right ventricle
17
2
2
1
right cardiac atrium
18
1
1
1
left cardiac atrium
18
heart
1
2
1
2
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primary cell
cardiac fibroblast
2
1
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