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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
Assay category
114
DNA binding
DNA accessibility
Target of assay
97
histone
97
histone modification
57
broad histone mark
40
narrow histone mark
17
transcription factor
11
RNA binding protein
Date released
47
April, 2019
40
May, 2024
15
May, 2019
5
October, 2019
4
February, 2021
3
June, 2019
Available data
190
bigWig
169
bam
168
tsv
114
bed narrowPeak
64
bigBed narrowPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
114
Homo sapiens
Biosample type
107
tissue
4
cell line
3
primary cell
Organ
413
liver
170
brain
140
pancreas
114
heart
97
epithelium
75
vasculature
73
blood vessel
58
connective tissue
54
blood
54
bodily fluid
48
limb
39
kidney
27
musculature of body
25
artery
24
nerve
14
embryo
12
spleen
10
vein
7
adipose tissue
2
eye
1
pituitary gland
Project
114
AMP
Genome assembly (visualization)
113
GRCh38
74
hg19
Lab
74
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
3
inconsistent ontology term
organ_slims!
bone element
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
114 results
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ChIP-seq
tissue
left cardiac atrium
40
heart left ventricle
29
heart
12
heart right ventricle
11
right atrium auricular region
7
+ See 2 more…
cell line
smooth muscle cell of the coronary artery
4
primary cell
cardiac fibroblast
3
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