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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
128
ChIP-seq
47
ATAC-seq
30
DNase-seq
Assay category
128
DNA binding
77
DNA accessibility
Target of assay
63
histone
63
histone modification
63
transcription factor
37
broad histone mark
26
narrow histone mark
16
RNA binding protein
10
chromatin remodeller
Date released
47
April, 2019
35
February, 2023
33
June, 2019
27
December, 2018
15
January, 2019
15
May, 2019
12
February, 2021
12
November, 2018
5
October, 2019
4
July, 2019
Available data
271
bam
239
bigWig
205
bed narrowPeak
168
tsv
148
bigBed narrowPeak
60
fastq
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
205
Homo sapiens
Biosample type
133
tissue
66
cell line
6
primary cell
Organ
441
liver
214
pancreas
203
brain
183
kidney
151
epithelium
151
heart
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
205
AMP
Genome assembly (visualization)
204
GRCh38
167
hg19
Lab
205
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
1
inconsistent control
BIOSAMPLE
ASSAY
205 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery
3
36
2
heart left ventricle
29
2
3
heart
12
18
heart right ventricle
11
1
right atrium auricular region
7
1
2
+ See 2 more…
cell line
GM12878
54
smooth muscle cell of the coronary artery
4
8
primary cell
cardiac fibroblast
3
3
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