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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
ChIP-seq
13
DNase-seq
6
WGBS
2
ATAC-seq
Assay category
96
DNA binding
15
DNA accessibility
6
DNA methylation
Target of assay
52
histone
52
histone modification
44
control
36
broad histone mark
16
narrow histone mark
Date released
64
November, 2017
15
June, 2019
10
April, 2019
9
May, 2019
7
July, 2019
7
October, 2019
3
October, 2017
2
February, 2021
Available data
140
bed narrowPeak
117
bam
112
bigWig
112
tsv
77
tagAlign
65
bigBed narrowPeak
13
bed bed3+
13
bed broadPeak
13
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
4
fastq
Organism
117
Homo sapiens
Biosample type
112
tissue
3
primary cell
2
cell line
Organ
96
liver
88
brain
54
pancreas
34
epithelium
30
connective tissue
29
heart
26
blood vessel
26
vasculature
21
adipose tissue
20
kidney
18
limb
11
nerve
10
spleen
9
artery
7
embryo
6
blood
6
bodily fluid
5
vein
4
musculature of body
1
eye
Project
117
AMP
Genome assembly (visualization)
406
GRCh38
hg19
Lab
117
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assembly!
hg19
BIOSAMPLE
ASSAY
117 results
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ChIP-seq
DNase-seq
WGBS
ATAC-seq
tissue
layer of hippocampus
19
caudate nucleus
13
1
substantia nigra
12
middle frontal area 46
11
heart left ventricle
6
2
+ See 25 more…
primary cell
cardiac fibroblast
2
1
cell line
smooth muscle cell of the coronary artery
2
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