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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
total RNA-seq
8
WGBS
4
ATAC-seq
4
small RNA-seq
2
RRBS
1
Hi-C
Assay category
25
Transcription
10
DNA methylation
4
DNA accessibility
1
3D chromatin structure
Date released
521
February, 2021
108
August, 2017
97
August, 2021
57
April, 2019
50
February, 2023
45
June, 2019
40
July, 2019
40
May, 2024
23
October, 2018
21
May, 2019
12
October, 2019
9
March, 2020
6
November, 2020
5
February, 2020
4
May, 2021
2
April, 2018
2
July, 2018
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
36
bigWig
35
bam
25
tsv
8
bed bedMethyl
8
bigBed bedMethyl
4
bed narrowPeak
1
bed bed3+
1
hdf5
Organism
40
Homo sapiens
Biosample type
30
tissue
10
primary cell
Organ
25
heart
18
brain
18
connective tissue
13
epithelium
12
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
40
AMP
Genome assembly (visualization)
35
GRCh38
32
hg19
Lab
40
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
40 results
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Clear Filters
total RNA-seq
WGBS
ATAC-seq
small RNA-seq
RRBS
Hi-C
tissue
heart left ventricle
2
4
2
1
omental fat pad
4
1
subcutaneous adipose tissue
4
1
heart
2
1
1
right atrium auricular region
2
1
+ See 3 more…
primary cell
mesenchymal stem cell of adipose
1
1
brain pericyte
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
+ See 4 more…
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