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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
8
snATAC-seq
2
pCHi-C
ATAC-seq
Assay category
42
DNA binding
8
DNA accessibility
Target of assay
37
transcription factor
4
RNA binding protein
4
chromatin remodeller
3
control
Date released
27
December, 2018
January, 2019
15
November, 2018
8
January, 2021
2
March, 2020
Available data
42
bam
42
fastq
39
bed narrowPeak
39
bigBed narrowPeak
39
bigWig
2
tsv
Organism
52
Homo sapiens
Biosample type
42
cell line
8
primary cell
2
tissue
Organ
794
pancreas
763
liver
659
connective tissue
485
adipose tissue
421
epithelium
346
heart
282
brain
279
kidney
190
vasculature
184
blood vessel
147
bone element
114
limb
96
artery
95
musculature of body
50
blood
50
bodily fluid
42
nerve
37
embryo
33
eye
22
vein
20
lung
18
ureter
17
spleen
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
44
AMP
8
T1D
Genome assembly (visualization)
39
GRCh38
39
hg19
Lab
44
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
assay_title!
ATAC-seq
month_released!
January, 2019
BIOSAMPLE
ASSAY
52 results
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ChIP-seq
snATAC-seq
pCHi-C
cell line
GM12878
42
primary cell
peripheral blood mononuclear cell
8
tissue
sigmoid colon
1
small intestine
1
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