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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
4
total RNA-seq
2
STARR-seq
2
pCHi-C
Assay category
10
DNA binding
4
Transcription
DNA accessibility
Target of assay
7
recombinant protein
7
transcription factor
3
control
Date released
14
October, 2019
2
August, 2021
2
March, 2020
Available data
14
bam
11
bigWig
7
bed narrowPeak
6
tsv
Organism
18
Homo sapiens
Biosample type
149
tissue
24
primary cell
18
cell line
Organ
400
liver
72
pancreas
60
blood
60
bodily fluid
59
epithelium
58
artery
58
blood vessel
58
heart
58
vasculature
18
kidney
8
embryo
1
mammary gland
Project
18
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
16
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
15
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
total RNA-seq
STARR-seq
pCHi-C
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 vector
3
1
1
RCC 7860 HIF2a over-expression
3
1
HEK293T
2
RCC 7860 VHL
1
glomerular visceral epithelial cell
1
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