Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
69
DNase-seq
6
snATAC-seq
1
FAIRE-seq
Assay category
151
DNA accessibility
119
Transcription
37
DNA binding
1
3D chromatin structure
1
DNA methylation
Date released
70
August, 2021
68
June, 2019
11
May, 2023
1
July, 2019
1
October, 2019
Available data
134
bed narrowPeak
70
bam
70
bigBed narrowPeak
70
bigWig
68
bed bed3+
68
bed broadPeak
68
bigBed broadPeak
64
xls
Organism
151
Homo sapiens
Biosample type
150
tissue
primary cell
1
cell line
Organ
151
kidney
102
pancreas
74
heart
51
blood vessel
51
vasculature
49
artery
44
limb
34
musculature of body
32
brain
32
epithelium
31
eye
26
connective tissue
26
liver
18
ureter
12
bone element
12
skeleton
10
lung
8
adipose tissue
3
nerve
2
spleen
1
blood
1
bodily fluid
1
pituitary gland
1
skin of body
Project
151
AMP
Genome assembly (visualization)
144
GRCh38
69
hg19
Lab
81
Katalin Susztak, Upenn
70
AMP-T2D consortium
biosample_type!
primary cell
BIOSAMPLE
ASSAY
151 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
DNase-seq
snATAC-seq
FAIRE-seq
tissue
kidney
75
13
6
1
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
+ See 4 more…
cell line
glomerular visceral epithelial cell
1
See all biosamples
Download