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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
68
DNase-seq
64
single cell RNA-seq
53
total RNA-seq
37
ChIP-seq
6
snATAC-seq
3
snDrop-seq
2
STARR-seq
2
pCHi-C
1
FAIRE-seq
1
Hi-C
1
RNA microarray
1
RRBS
1
small RNA-seq
Assay category
37
DNA binding
Target of assay
20
histone
20
histone modification
10
broad histone mark
10
narrow histone mark
9
control
8
transcription factor
7
recombinant protein
1
RNA binding protein
Date released
23
April, 2019
14
October, 2019
Available data
37
bam
27
bed narrowPeak
27
bigWig
18
bigBed narrowPeak
Organism
37
Homo sapiens
Biosample type
27
tissue
10
cell line
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
37
AMP
Genome assembly (visualization)
27
GRCh38
27
hg19
Lab
37
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
organ_slims!
epithelium
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
tissue
kidney
27
cell line
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
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