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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
DNase-seq
75
ATAC-seq
64
single cell RNA-seq
60
total RNA-seq
37
ChIP-seq
6
snATAC-seq
4
RRBS
3
snDrop-seq
2
RNA microarray
2
STARR-seq
2
pCHi-C
1
FAIRE-seq
1
Hi-C
1
small RNA-seq
Assay category
37
DNA binding
Target of assay
30
histone
30
histone modification
15
broad histone mark
narrow histone mark
12
control
10
transcription factor
7
recombinant protein
3
RNA binding protein
Date released
16
October, 2019
15
April, 2019
4
May, 2019
2
June, 2019
Available data
37
bam
24
bed narrowPeak
24
bigWig
14
bigBed narrowPeak
Organism
37
Homo sapiens
Biosample type
17
tissue
10
cell line
10
primary cell
Organ
492
liver
145
pancreas
120
connective tissue
101
brain
80
epithelium
76
vasculature
74
blood vessel
69
heart
61
adipose tissue
59
blood
59
bodily fluid
51
limb
37
kidney
28
artery
27
nerve
26
musculature of body
18
spleen
14
embryo
11
vein
2
eye
Project
37
AMP
Genome assembly (visualization)
24
GRCh38
24
hg19
Lab
37
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
tissue
kidney
17
cell line
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
primary cell
epithelial cell of proximal tubule
6
kidney epithelial cell
4
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