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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
single cell RNA-seq
57
total RNA-seq
1
small RNA-seq
Assay category
122
Transcription
98
DNA accessibility
36
DNA binding
3
DNA methylation
1
3D chromatin structure
Date released
57
August, 2021
47
September, 2023
6
July, 2019
5
February, 2021
3
May, 2023
3
October, 2019
1
December, 2019
Available data
62
txt
14
tsv
9
bam
9
bigWig
5
csv
Organism
122
Homo sapiens
Biosample type
115
tissue
6
primary cell
1
cell line
Organ
479
connective tissue
441
pancreas
401
adipose tissue
193
liver
166
epithelium
166
heart
122
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
23
brain
19
eye
12
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
75
AMP
47
KPMP
Genome assembly (visualization)
9
GRCh38
9
hg19
Lab
60
Katalin Susztak, Upenn
47
KPMP
15
AMP-T2D consortium
Audit category:
5
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inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
files.file_type!
xls
BIOSAMPLE
ASSAY
122 results
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single cell RNA-seq
total RNA-seq
small RNA-seq
tissue
kidney
64
49
metanephros
1
1
primary cell
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
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cell line
glomerular visceral epithelial cell
1
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