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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
6
snATAC-seq
3
DNase-seq
1
FAIRE-seq
Assay category
125
Transcription
85
DNA accessibility
52
DNA binding
4
DNA methylation
1
3D chromatin structure
Date released
70
August, 2021
11
May, 2023
3
October, 2019
1
July, 2019
Available data
144
bed narrowPeak
80
bam
80
bigBed narrowPeak
80
bigWig
bed bed3+
78
bed broadPeak
78
bigBed broadPeak
64
xls
Organism
85
Homo sapiens
Biosample type
82
tissue
2
primary cell
1
cell line
Organ
166
pancreas
107
epithelium
85
kidney
47
blood vessel
47
heart
47
vasculature
45
artery
28
eye
24
liver
22
connective tissue
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
limb
6
adipose tissue
5
brain
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
1
vein
Project
85
AMP
Genome assembly (visualization)
76
GRCh38
2
hg19
Lab
81
Katalin Susztak, Upenn
4
AMP-T2D consortium
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
85 results
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ATAC-seq
snATAC-seq
DNase-seq
FAIRE-seq
tissue
kidney
75
6
1
primary cell
kidney glomerular epithelial cell
1
kidney tubule cell
1
cell line
glomerular visceral epithelial cell
1
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