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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
9
DNase-seq
6
total RNA-seq
Assay category
15
DNA binding
9
DNA accessibility
6
Transcription
Target of assay
10
histone
10
histone modification
5
broad histone mark
5
narrow histone mark
3
control
2
RNA binding protein
2
transcription factor
Date released
12
June, 2019
9
October, 2019
5
May, 2019
4
July, 2019
Available data
30
bam
27
bigWig
21
bed narrowPeak
15
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
6
tsv
3
bed bedMethyl
3
bigBed bedMethyl
Organism
30
Homo sapiens
Biosample type
98
tissue
30
primary cell
15
cell line
Organ
242
epithelium
194
pancreas
36
connective tissue
vasculature
31
kidney
27
blood vessel
20
vein
17
brain
13
musculature of body
12
heart
12
liver
4
eye
2
adipose tissue
2
artery
1
pericardium
Project
30
AMP
Genome assembly (visualization)
27
GRCh38
22
hg19
Lab
30
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
organ_slims!
vasculature
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
DNase-seq
total RNA-seq
primary cell
epithelial cell of proximal tubule
10
1
1
kidney epithelial cell
5
1
1
kidney tubule cell
2
1
glomerular endothelial cell
1
1
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
1
1
renal cortical epithelial cell
1
1
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