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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
6
total RNA-seq
1
DNase-seq
Assay category
21
DNA binding
6
Transcription
1
DNA accessibility
Target of assay
8
histone
8
histone modification
7
recombinant protein
7
transcription factor
6
control
5
narrow histone mark
3
broad histone mark
Date released
81
June, 2019
28
October, 2019
23
April, 2019
7
July, 2019
5
May, 2019
Available data
28
bam
22
bigWig
16
bed narrowPeak
6
tsv
1
bigBed narrowPeak
Organism
28
Homo sapiens
Biosample type
15
cell line
9
primary cell
4
tissue
Organ
83
brain
68
limb
46
blood vessel
46
vasculature
42
nerve
32
epithelium
28
kidney
26
artery
20
vein
14
pancreas
7
heart
7
liver
1
pituitary gland
Project
28
AMP
Genome assembly (visualization)
22
GRCh38
22
hg19
Lab
28
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
total RNA-seq
DNase-seq
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
glomerular visceral epithelial cell
1
1
primary cell
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
kidney tubule cell
1
tissue
kidney
4
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