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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
DNase-seq
75
ATAC-seq
6
snATAC-seq
1
FAIRE-seq
Assay category
160
DNA accessibility
119
Transcription
31
DNA binding
4
DNA methylation
1
3D chromatin structure
Date released
78
June, 2019
70
August, 2021
11
May, 2023
October, 2019
1
July, 2019
Available data
143
bed narrowPeak
79
bam
79
bigBed narrowPeak
79
bigWig
78
bed bed3+
78
bed broadPeak
78
bigBed broadPeak
64
xls
Organism
160
Homo sapiens
Biosample type
150
tissue
10
primary cell
Organ
169
pancreas
160
kidney
116
epithelium
77
heart
52
vasculature
50
blood vessel
46
artery
38
limb
36
brain
35
musculature of body
31
connective tissue
31
eye
28
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
7
adipose tissue
2
spleen
Project
160
AMP
Genome assembly (visualization)
153
GRCh38
72
hg19
Lab
81
Katalin Susztak, Upenn
79
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
160 results
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DNase-seq
ATAC-seq
snATAC-seq
FAIRE-seq
tissue
kidney
13
75
6
1
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
+ See 4 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney capillary endothelial cell
1
+ See 3 more…
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