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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
5
total RNA-seq
4
RRBS
3
single cell RNA-seq
1
FAIRE-seq
1
small RNA-seq
Assay category
12
DNA accessibility
9
Transcription
4
DNA methylation
Date released
130
August, 2021
81
June, 2019
47
September, 2023
30
October, 2019
23
April, 2019
14
May, 2023
11
July, 2019
8
February, 2021
5
May, 2019
3
December, 2019
2
March, 2020
Available data
7
bam
7
bigWig
6
tsv
4
bed bedMethyl
4
bigBed bedMethyl
1
bed narrowPeak
1
bigBed narrowPeak
Organism
25
Homo sapiens
Biosample type
18
tissue
7
primary cell
Organ
25
heart
25
kidney
19
connective tissue
18
brain
13
adipose tissue
13
epithelium
12
vasculature
11
blood vessel
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
25
AMP
Genome assembly (visualization)
17
GRCh38
11
hg19
Lab
14
Katalin Susztak, Upenn
11
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
25 results
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ATAC-seq
total RNA-seq
RRBS
single cell RNA-seq
FAIRE-seq
small RNA-seq
tissue
kidney
11
1
3
1
metanephros
1
1
primary cell
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
glomerular endothelial cell
1
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