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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
6
total RNA-seq
3
DNase-seq
1
ATAC-seq
Assay category
21
DNA binding
6
Transcription
4
DNA accessibility
Target of assay
8
histone
8
histone modification
7
recombinant protein
7
transcription factor
6
control
5
narrow histone mark
3
broad histone mark
Date released
394
February, 2021
131
August, 2021
82
June, 2019
57
August, 2017
47
September, 2023
31
October, 2019
23
April, 2019
23
July, 2019
23
October, 2018
15
May, 2023
5
May, 2019
3
December, 2019
3
March, 2020
2
February, 2020
1
August, 2018
1
February, 2023
1
January, 2018
1
November, 2018
1
November, 2019
1
October, 2017
Available data
28
bam
23
bigWig
16
bed narrowPeak
6
tsv
2
bigBed narrowPeak
Organism
31
Homo sapiens
Biosample type
15
cell line
11
primary cell
5
tissue
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
31
AMP
Genome assembly (visualization)
23
hg19
22
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
BIOSAMPLE
ASSAY
31 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
glomerular visceral epithelial cell
1
1
primary cell
epithelial cell of proximal tubule
7
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
tissue
kidney
4
adipose tissue
1
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