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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
ChIP-seq
Assay category
172
DNA accessibility
125
Transcription
112
DNA binding
4
DNA methylation
1
3D chromatin structure
Target of assay
61
transcription factor
31
histone
31
histone modification
18
control
16
narrow histone mark
15
broad histone mark
13
RNA binding protein
10
chromatin remodeller
7
recombinant protein
Date released
27
December, 2018
23
April, 2019
21
October, 2019
18
January, 2019
15
November, 2018
5
May, 2019
3
June, 2019
Available data
112
bam
93
bed narrowPeak
93
bigWig
78
bigBed narrowPeak
60
fastq
Organism
112
Homo sapiens
Biosample type
70
cell line
27
tissue
15
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
112
AMP
Genome assembly (visualization)
93
GRCh38
93
hg19
Lab
112
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
1
inconsistent control
BIOSAMPLE
ASSAY
112 results
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Clear Filters
ChIP-seq
cell line
GM12878
60
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
tissue
kidney
27
primary cell
epithelial cell of proximal tubule
10
kidney epithelial cell
5
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